tpx
 
Information for tpx, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1384744-1386285
+
CDS
transcriptional regulation of aroF; aroG; tyrA and aromatic amino acid transport
1386329-1386835
-
CDS
tpx
thiol peroxidase
1386912-1387919
+
CDS
putative muconate cycloisomerase I (EC 5.5.-.-)
 
Reported regulatory sites for tpx:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.929
1386848-1386867 R
gtgtg ACGTTAACTATATGTAAACA ggaaa
-
0
-
1.648
1386876-1386897 R
gctgt GTTATTGACAGTTAGCATAAAC taggt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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