treB
 
Information for treB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4460628-4462283
-
CDS
trehalase 6-P hydrolase
4462333-4463754
-
CDS
treB
PTS system enzyme II; trehalose specific
4463873-4464820
-
CDS
repressor of treA;B;C
 
Reported regulatory sites for treB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
4463820-4463833
treR
repressor of treABC
 
Species with an ortholog: ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.750
4463819-4463834 R
gcgtt TCGGGAACGTTCCCGT tttta
treR
14
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.934
4463756-4463776 R
caaaa ATGTCATCTGCCATGGGGCTT tatga
-
0
-
0.721
4463846-4463865 R
gtttc CTGAACGATAAATTGTGATC ttcgc
-
0
-
0.721
4463787-4463806 R
ttttt CCGCGCAATATATTCTGCAG ccaac
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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