treF
 
Information for treF, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3665421-3666818
-
CDS
putative cytochrome C peroxidase (EC 1.11.1)
3667222-3668871
+
CDS
treF
cytoplasmic trehalase
3668922-3669524
-
CDS
putative regulator
 
Reported regulatory sites for treF:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.912
3667119-3667142
gttaa TAAACGTGATCCACCGCACGCTTT gtcgc
-
0
-
2.370
3667157-3667176
caggc GGAGCGAATGACTACCCTTA aagaa
-
0
-
0.387
3666939-3666962
aatca ATCAATTACATGAATATAAACTAT caata
-
0
-
0.387
3667065-3667088
aaatc GGTATTTTTATAAATTCCATTGAT attag
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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