trpR
 
Information for trpR, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4628275-4630239
+
CDS
soluble lytic murein transglycosylase
4630329-4630655
+
CDS
trpR
regulator for trp operon and aroH; trp aporepressor
4630802-4631323
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for trpR:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
4630261-4630284
trpR
regulator for trp operon and aroH; trp aporepressor
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.494
4630262-4630283
tgcta TCGTACTCTTTAGCGAGTACAA ccggg
trpR
22
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.500
4630289-4630305
ccggg GGAGGCATTTTGCTTCC cccgc
-
0
-
0.237
4630313-4630328
cgcta ACAATGGCGACATATT atggc
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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