ttk
 
Information for ttk, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3811559-3812014
+
CDS
deoxyuridinetriphosphatase
3812079-3812717
+
CDS
ttk
putative transcriptional regulator
3812754-3813395
-
CDS
orotate phosphoribosyltransferase
 
Reported regulatory sites for ttk:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.851
3812047-3812067
catag CCGCAAACATTTCGTTTGCGG tcata
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.707
3812023-3812046
atacg CATCCGAATAACGTCATAACATAG ccgca
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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