tufA
 
Information for tufA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3464797-3467490
-
CDS
putative enzyme
3467782-3468966
-
CDS
tufA
protein chain elongation factor EF-Tu (duplicate of tufB)
3469037-3471151
-
CDS
GTP-binding protein chain elongation factor EF-G
 
Reported regulatory sites for tufA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
7.662
4173357-4173377
tagag CGCACCCTTGGTAAGGGTGAG gtcgg
-
0
-
6.083
4173078-4173094
aggga GCAGACTGTAAATCTGC cgtca
-
0
-
6.083
4173278-4173294
ttacc TCAGCCTTCCAAGCTGA tgatg
-
0
-
5.756
4173108-4173124
acttc GAAGGTTCGAATCCTTC cccca
-
0
-
5.756
4173299-4173315
atgat GCGGGTTCGATTCCCGC tgccc
-
0
-
3.848
4173323-4173346
cccgc TCCAAGATGTGCTGATATAGCTCA gttgg
-
0
-
3.848
4173472-4173495
ttgcc TGGTTGATGTGGTGATATCACCGA tttat
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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