tufB
 
Information for tufB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4173333-4173408
+
tRNA
Threonine tRNA3
4173523-4174707
+
CDS
tufB
protein chain elongation factor EF-Tu (duplicate of tufA)
4174937-4175320
+
CDS
preprotein translocase
 
Reported regulatory sites for tufB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: VC ST YP EC HI PA SP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.836
4173474-4173493
gcctg GTTGATGTGGTGATATCACC gattt
-
0
-
2.115
4173442-4173458
ctgtt TATTGCATTCAACAAGT cgggc
-
0
-
1.883
4173496-4173516
accga TTTATCCGTGTCTTAGAGGGA caatc
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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