tyrS
 
Information for tyrS, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1713050-1713913
-
CDS
pyridoxal kinase 2 / pyridoxine kinase
1713972-1715246
-
CDS
tyrS
tyrosine tRNA synthetase
1715375-1716031
-
CDS
pyridoxinephosphate oxidase
 
Reported regulatory sites for tyrS:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.868
1715316-1715339 R
gtact CCTGATTCTGGCACTTTATTCTAT gtctc
-
0
-
1.868
1715256-1715279 R
ccggc AAAGGTGCAGTCGTTATATACATG gagat
-
0
-
1.792
1715357-1715374 R
cctga AAAGATGCAAAAATCTTG cttta
-
0
-
1.737
1715293-1715314 R
ctatg TCTCTTTCGCATCTGGCGAAAA gtcgt
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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