|
tyrS
|
| |
| Information
for tyrS, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1713050-1713913
|
-
|
CDS
|
|
|
pyridoxal kinase 2 / pyridoxine kinase
|
|
1713972-1715246
|
-
|
CDS
|
tyrS
|
|
tyrosine tRNA synthetase
|
|
1715375-1716031
|
-
|
CDS
|
|
|
pyridoxinephosphate oxidase
|
|
| |
Reported regulatory
sites for tyrS:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.868
|
1715316-1715339 R
|
gtact CCTGATTCTGGCACTTTATTCTAT gtctc
|
-
|
0
|
-
|
|
|
|
|
1.868
|
1715256-1715279 R
|
ccggc AAAGGTGCAGTCGTTATATACATG gagat
|
-
|
0
|
-
|
|
|
|
|
1.792
|
1715357-1715374 R
|
cctga AAAGATGCAAAAATCTTG cttta
|
-
|
0
|
-
|
|
|
|
|
1.737
|
1715293-1715314 R
|
ctatg TCTCTTTCGCATCTGGCGAAAA gtcgt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|