ubiE
 
Information for ubiE, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4014920-4016347
+
CDS
putative alpha helix chain
4016442-4017197
+
CDS
ubiE
2-octaprenyl-6-methoxy-1;4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1;4-benzoquinone
4017211-4017816
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for ubiE:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.390
4016380-4016397
aaatc TAGGGCATCGACGCCCAA tctgt
-
0
-
2.211
4016420-4016436
acaat TTTTTGATGAGCAGGCA ttgag
-
0
-
1.673
4016398-4016414
cccaa TCTGTTACACTTCTGGA acaat
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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