ugd

Information for ugd, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 2095343-2096359 - CDS wzzB EG13406 regulator of length of O-antigen component of lipopolysaccharide chains 2096469-2097635 - CDS ugd EG13407 UDP-glucose 6-dehydrogenase 2097884-2099290 - CDS gnd EG10411 gluconate-6-phosphate dehydrogenase; decarboxylating

Reported regulatory sites for ugd: Genome coordinates Source Transcription factor Transcription factor annotation

Species with an ortholog: PA SP ST EC VC YP

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 2.198 2097779-2097795 R cactg CTTAATATTAACTTAAT aaata - 0 - 2.198 2097745-2097761 R ttctt ATAAAGAAAATCTGAAT tgttt - 0 - 2.039 2097663-2097679 R atgct AAAAACATCATGATTCA cagtt - 0 - 1.609 2097693-2097711 R acgta GCGTTAAAACTTTTAGCTC ttatc - 0 -

Critical MAP values: p=0.01 5.41 p=0.05 4.01 p=0.1 3.43 p=0.2 2.86

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