|
uraA
|
| |
| Information
for uraA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2616095-2616841
|
-
|
CDS
|
|
|
putative DNA replication factor
|
|
2616891-2618180
|
-
|
CDS
|
uraA
|
|
uracil transport
|
|
2618266-2618919
|
-
|
CDS
|
|
|
uracil phosphoribosyltransferase
|
|
| |
Reported regulatory
sites for uraA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.517
|
2618237-2618252 R
|
aataa TTAAAGCCGACTTTAA gagtc
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.191
|
2618212-2618230 R
|
agtcg GCTTTTTTTTGAGTAAAGC gccta
|
-
|
0
|
-
|
|
|
|
|
0.453
|
2618192-2618209 R
|
agcgc CTATAACACATAATACAG aggat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.40
|
|
p=0.05
|
4.29
|
|
p=0.1
|
3.77
|
|
p=0.2
|
3.19
|
|
|