uvrA
 
Information for uvrA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4268237-4268593
+
CDS
orf; hypothetical protein
4268628-4271450
-
CDS
uvrA
excision nuclease subunit A
4271704-4272240
+
CDS
ssDNA-binding protein
 
Reported regulatory sites for uvrA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
4271534-4271553
lexA
regulator for SOS(lexA) regulon
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.848
4271536-4271551 R
caata CTGTATATTCATTCAG gtcaa
lexA
16
-
2.830
4271513-4271535 R
ttcag GTCAATTTGTGTCATAATTAACC gtttg
lexA
2
-
1.373
4271650-4271667 R
taagt GTAAACGCGCGATTGTAC catta
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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