|
uxaB
|
| |
| Information
for uxaB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1606132-1607097
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
1607253-1608704
|
-
|
CDS
|
uxaB
|
|
altronate oxidoreductase
|
|
1608931-1609878
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for uxaB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.519
|
1608728-1608744 R
|
tacca ATTCAAACAGGTTGTAT gacta
|
-
|
0
|
-
|
|
|
|
|
0.580
|
1608787-1608810 R
|
tgctc ATTAATCATCAGGAGTTGATCAAA acagg
|
-
|
0
|
-
|
|
|
|
|
0.235
|
1608855-1608876 R
|
atgat CCAGGAAAAGGCGTTTTTCCTC gatta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.55
|
|
p=0.05
|
3.60
|
|
p=0.1
|
3.00
|
|
p=0.2
|
2.32
|
|
|