wcaJ
 
Information for wcaJ, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2116702-2118180
-
CDS
probable export protein
2118182-2119576
-
CDS
wcaJ
putative colanic acid biosynthsis UDP-glucose lipid carrier transferase
2119631-2121001
-
CDS
phosphomannomutase
 
Reported regulatory sites for wcaJ:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
7.319
2119596-2119619 R
atctt CCCTTACCCCACTGCGGGTAAGGG gctaa
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.121
2119578-2119595 R
aaggg GCTAATAACAGGAACAAC gatga
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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