|
wcaJ
|
| |
| Information
for wcaJ, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2116702-2118180
|
-
|
CDS
|
|
|
probable export protein
|
|
2118182-2119576
|
-
|
CDS
|
wcaJ
|
|
putative colanic acid biosynthsis UDP-glucose lipid carrier transferase
|
|
2119631-2121001
|
-
|
CDS
|
|
|
phosphomannomutase
|
|
| |
Reported regulatory
sites for wcaJ:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
7.319
|
2119596-2119619 R
|
atctt CCCTTACCCCACTGCGGGTAAGGG gctaa
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.121
|
2119578-2119595 R
|
aaggg GCTAATAACAGGAACAAC gatga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|