|
wecD
|
| |
| Information
for wecD, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3971220-3972101
|
+
|
CDS
|
|
|
glucose-1-phosphate thymidylyltransferase
|
|
3972208-3972753
|
+
|
CDS
|
wecD
|
|
orf; hypothetical protein
|
|
3972758-3973888
|
+
|
CDS
|
|
|
putative regulator
|
|
| |
Reported regulatory
sites for wecD:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.322
|
3972112-3972131
|
taacc TGGGAAAACGCCTTCTTTGG tgtta
|
-
|
0
|
-
|
|
|
|
|
1.870
|
3972178-3972199
|
tcctg ACGCCAGACGCGTTAGCGCCGT ggtca
|
-
|
0
|
-
|
|
|
|
|
1.186
|
3972136-3972155
|
gtgtt AACAGCGCCATCGTGCGCAT tacgt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|