wrbA
 
Information for wrbA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1066087-1066314
-
CDS
orf; hypothetical protein
1066335-1066931
-
CDS
wrbA
trp repressor binding protein; affects association of trp repressor and operator
1067141-1067371
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for wrbA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.464
1066962-1066978 R
taagt GGTAGCGAATCGCTACG gaata
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.394
1067072-1067088 R
gagat AAAAATGTGTCATTTTG cgaca
-
0
-
1.853
1067099-1067114 R
cgctc TTATGATTAAAAAAAC gcgat
-
0
-
1.853
1067031-1067046 R
gaaag TTGTTATAAATCAAAT aagtg
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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