wzzB
 
Information for wzzB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2094636-2095247
+
CDS
phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase
2095343-2096359
-
CDS
wzzB
regulator of length of O-antigen component of lipopolysaccharide chains
2096469-2097635
-
CDS
UDP-glucose 6-dehydrogenase
 
Reported regulatory sites for wzzB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.863
2096416-2096432 R
ttgtc TTTTGTTACTTACACAA caatt
-
0
-
1.863
2096388-2096404 R
attat TTTTATCACTTATCCTA tagca
-
0
-
0.862
2096441-2096464 R
acatc TTGTTATCAGGGCTATTTACGCCC tgatt
-
0
-
0.862
2096364-2096387 R
tccta TAGCATTCACGAGGATTATCGCTA aacta
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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