|
xapB
|
| |
| Information
for xapB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2519613-2520497
|
-
|
CDS
|
|
|
regulator for xapA
|
|
2520749-2522005
|
-
|
CDS
|
xapB
|
|
xanthosine permease
|
|
2522065-2522898
|
-
|
CDS
|
|
|
xanthosine phosphorylase
|
|
| |
Reported regulatory
sites for xapB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.603
|
2522016-2522037 R
|
cgcgg GTGAGGCCAAATGATGCGACAA ggaaa
|
-
|
0
|
-
|
|
|
|
|
1.144
|
2522030-2522047 R
|
gaaac GGCCTCGCGGGTGAGGCC aaatg
|
-
|
0
|
-
|
|
-
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|