xerD

Information for xerD, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 3036132-3036842 - CDS dsbC EG11070 protein disulfide isomerase II 3036867-3037763 - CDS xerD EG11071 site-specific recombinase 3037875-3038396 + CDS fldB EG12697 flavodoxin 2

Reported regulatory sites for xerD: Genome coordinates Source Transcription factor Transcription factor annotation

Species with an ortholog: HI PA SP ST EC VC YP

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 2.447 3037820-3037836 R cggct AGTGTATCAGAATCGCT ttagt - 0 - 1.043 3037791-3037808 R acggc ACAATAAGGCATAATGGA tcaaa - 0 - 0.121 3037843-3037861 R cttct CGATTCTGCTGTGGCTTTT gcggc - 0 -

Critical MAP values: p=0.01 4.80 p=0.05 3.45 p=0.1 2.95 p=0.2 2.42

Click here to go back