xseA
 
Information for xseA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2630624-2632090
-
CDS
IMP dehydrogenase
2632252-2633622
+
CDS
xseA
exonuclease VII; large subunit
2633619-2633870
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for xseA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2632234-2632256
crp
cyclic AMP receptor protein
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.650
2632121-2632138
aataa ATATTGCCGCGGCATTAT acaga
-
0
-
3.636
2632215-2632233
tcgac TGAATAACCTGCTGATTTA gaatt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.906
2632091-2632106
agcat GGGCAATATCTCGACC agagt
-
0
-
2.906
2632144-2632159
acaga GCGTAACCGATTGCAT ctacc
purR
16
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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