|
xylE
|
| |
| Information
for xylE, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4237904-4238314
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
4238358-4239833
|
-
|
CDS
|
xylE
|
|
xylose-proton symport
|
|
4240205-4241095
|
-
|
CDS
|
|
|
part of maltose permease; inner membrane
|
|
| |
Reported regulatory
sites for xylE:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.689
|
4239970-4239993 R
|
acggc AATAGTATTGTTTTTATCAATTTT ggata
|
-
|
0
|
-
|
|
|
|
|
1.686
|
4239955-4239972 R
|
tcaat TTTGGATAATTATCACAA ttaag
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|