|
xylG
|
| |
| Information
for xylG, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3728760-3729752
|
+
|
CDS
|
|
|
xylose binding protein transport system
|
|
3729830-3731371
|
+
|
CDS
|
xylG
|
|
putative ATP-binding protein of xylose transport system
|
|
3731349-3732530
|
+
|
CDS
|
|
|
putative xylose transport; membrane component
|
|
| |
Reported regulatory
sites for xylG:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.352
|
3729777-3729794
|
agcgg GGGCGTGATTTCTCTCCA tgccg
|
-
|
0
|
-
|
|
|
|
|
0.593
|
3729762-3729778
|
tacgc CCCAGCGCGGAGCGGGG gcgtg
|
-
|
0
|
-
|
|
-
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.78
|
|
p=0.05
|
3.24
|
|
p=0.1
|
2.72
|
|
p=0.2
|
2.16
|
|
|