xylR
 
Information for xylR, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3731349-3732530
+
CDS
putative xylose transport; membrane component
3732608-3733786
+
CDS
xylR
putative regulator of xyl operon
3733982-3734806
-
CDS
putative ATP-binding protein
 
Reported regulatory sites for xylR:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.102
3732580-3732603
tgagt TTTTGCATGATTCAGCAGGAAAAG aacca
-
0
-
1.578
3732533-3732551
tgatt TTGATAAAAATTTTCTCAA agccg
-
0
-
0.865
3732552-3732573
ctcaa AGCCGGTTACGTATTACCGGTT ttgag
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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