yabH
 
Information for yabH, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
54755-57109
-
CDS
organic solvent tolerance
57364-58179
+
CDS
yabH
putative DNA binding protein
58474-59124
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for yabH:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.403
57187-57206
ctcta CGCTAGTGTTAATCCTGTCC gaata
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.802
57240-57262
attga ATGACAGGTATGATAATGCAAAT tatag
-
0
-
3.147
57263-57280
caaat TATAGGCGATGTCCCACA attga
-
0
-
3.147
57320-57337
tatat TGTGGGAGATAGCCCTGA tatcc
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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