yabM
 
Information for yabM, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
75644-77299
-
CDS
putative transport protein
77621-78799
+
CDS
yabM
putative transport protein
78848-79453
-
CDS
isopropylmalate isomerase subunit
 
Reported regulatory sites for yabM:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.545
77345-77367
cccta TATTAAGTCAATAATTCCTAACG atgaa
-
0
-
0.698
77367-77390
ctaac GATGAAGCAAGGGGGTGCCCCATG cgtca
-
0
-
0.604
77557-77576
gtaaa ATCACCCGCCAGCAGATTAT acctg
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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