yadQ
 
Information for yadQ, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
173602-174882
-
CDS
glutamate-1-semialdehyde aminotransferase (aminomutase)
175107-176528
+
CDS
yadQ
putative channel transporter
176610-176954
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for yadQ:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.513
175025-175045
gaaac ATTACGCTTTGCAAAGGATTT tcatg
-
0
-
3.089
175004-175027
gtata AAAGTTTTGTGCATTTGAAACATT acgct
-
0
-
2.999
175078-175094
catct TATTTGTATGACCAATA agtga
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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