yadR
 
Information for yadR, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
175107-176528
+
CDS
putative channel transporter
176610-176954
+
CDS
yadR
orf; hypothetical protein
177001-177624
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for yadR:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.889
176528-176551
acttg AACGAAATACCAGGGTATTAGATA atggc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.481
176558-176580
tggcg ATTATTATTGGGTTAGAATTTGC ccaat
-
0
-
1.401
176592-176608
gccga TGTCGTTTGGAGCAAAA tatga
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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