yaeD
 
Information for yaeD, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
221614-222645
-
CDS
ATP-binding component of a transporter
222833-223408
+
CDS
yaeD
putative phosphatase
223771-225312
+
rRNA
16S RNA of rrnH operon
 
Reported regulatory sites for yaeD:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.933
222732-222747
aaggc ATCCAGACGTCTAAAT caatc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.142
222787-222809
gtcga AACATGCGATACTAGCGTCACAT gcctt
-
0
-
1.602
222649-222668
attga TTATTTATTATCGTCATTAA gttag
-
0
-
1.602
222813-222832
atgcc TTATTAAGGAGCTATAAAAG gtggc
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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