yafH

Information for yafH, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 240343-240816 + CDS ykfE EG13547 orf; hypothetical protein 240859-243339 - CDS yafH EG13145 putative acyl-CoA dehydrogenase (EC 1.3.99.-) 243543-244121 + CDS gmhA EG13146 phosphoheptose isomerase

Reported regulatory sites for yafH: Genome coordinates Source Transcription factor Transcription factor annotation

Species with an ortholog: PA SP ST EC VC YP

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 2.952 243489-243505 R aaatg CAGTGTACCGGATACCG ccaaa - 0 - 2.696 243381-243399 R gttgt AATTATATTGTAAACATAT tgcta - 0 - 2.465 243522-243539 R atgag GATATCCTTCAGCATAAA tgtaa - 0 -

Critical MAP values: p=0.01 5.41 p=0.05 4.01 p=0.1 3.43 p=0.2 2.86

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