yafM
 
Information for yafM, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
246712-247461
+
CDS
putative lipoprotein
247637-248134
+
CDS
yafM
orf; hypothetical protein
248358-250097
-
CDS
flagellar biosynthesis
 
Reported regulatory sites for yafM:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.194
247461-247483
ttgta GGACGGATAAGGCGTTTACGCCG catcc
-
0
REP18a (23)
0.359
247558-247574
tattt GCGAGCCGCTTTCCCGA tataa
-
0
-
 
Critical MAP values:
p=0.01
6.09
p=0.05
4.94
p=0.1
4.37
p=0.2
3.74

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