|
yaiC
|
| |
| Information
for yaiC, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
402487-402825
|
+
|
CDS
|
|
|
induced by phosphate starvation
|
|
402927-404042
|
+
|
CDS
|
yaiC
|
|
orf; hypothetical protein
|
|
404059-404868
|
-
|
CDS
|
|
|
pyrroline-5-carboxylate reductase
|
|
| |
Reported regulatory
sites for yaiC:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.347
|
402844-402867
|
taacg GGTGAGCTACGAAAATGGCTCACC cgaaa
|
-
|
0
|
-
|
|
|
|
|
5.318
|
402902-402921
|
gtctc TATAATTTGGGAAAATTGTT tctga
|
-
|
0
|
-
|
|
|
|
|
2.871
|
402868-402884
|
tcacc CGAAATATCATACTTCT gcctt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|