|
yaiT
|
| |
| Information
for yaiT, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
389121-389390
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
389475-390935
|
+
|
CDS
|
yaiT
|
|
orf; hypothetical protein
|
|
390963-391829
|
-
|
CDS
|
|
|
IS3 putative transposase
|
|
| |
Reported regulatory
sites for yaiT:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.642
|
389422-389442
|
tttct ATGCATTGATAATTGATGGAT caact
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.380
|
389450-389473
|
actta TTACGTCCCTGAGGAGGGATGACA aatgc
|
-
|
0
|
-
|
|
|
|
|
3.767
|
389403-389419
|
agcgc GAAACATAATATGTTTT ctatg
|
-
|
0
|
-
|
|
-
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|