|
yajI
|
| |
| Information
for yajI, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
430353-431237
|
-
|
CDS
|
|
|
nucleoside channel; receptor of phage T6 and colicin K
|
|
431536-432135
|
-
|
CDS
|
yajI
|
|
orf; hypothetical protein
|
|
432226-432675
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for yajI:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
7.945
|
432149-432167 R
|
tacaa CAAAGGCGCAACGCTTTTG agata
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.197
|
432168-432191 R
|
atcta TTTTACCCTGAACTGACGATACAA caaag
|
-
|
0
|
-
|
|
|
|
|
2.738
|
432208-432225 R
|
tgcat ACGGCGTCCTGACCAGGT ggtta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|