yajK
 
Information for yajK, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
440325-440567
-
CDS
exonuclease VII; small subunit
440773-442221
+
CDS
yajK
putative oxidoreductase
442275-442871
-
CDS
4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis
 
Reported regulatory sites for yajK:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.811
440681-440698
gtggt ATACTTCCGCGCCTGGAT gcagc
-
0
-
1.343
440594-440610
atttt TCGCCCCGTCATGGTAA cggac
-
0
-
1.343
440632-440648
agcaa ATAACGCGCAATGGTAA ggtga
-
0
-
1.087
440649-440666
ggtaa GGTGATGTGCACAGCAAA gcgat
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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