|
yajK
|
| |
| Information
for yajK, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
440325-440567
|
-
|
CDS
|
|
|
exonuclease VII; small subunit
|
|
440773-442221
|
+
|
CDS
|
yajK
|
|
putative oxidoreductase
|
|
442275-442871
|
-
|
CDS
|
|
|
4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis
|
|
| |
Reported regulatory
sites for yajK:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.811
|
440681-440698
|
gtggt ATACTTCCGCGCCTGGAT gcagc
|
-
|
0
|
-
|
|
|
|
|
1.343
|
440594-440610
|
atttt TCGCCCCGTCATGGTAA cggac
|
-
|
0
|
-
|
|
|
|
|
1.343
|
440632-440648
|
agcaa ATAACGCGCAATGGTAA ggtga
|
-
|
0
|
-
|
|
|
|
|
1.087
|
440649-440666
|
ggtaa GGTGATGTGCACAGCAAA gcgat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|