|
yajQ
|
| |
| Information
for yajQ, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
442828-443739
|
-
|
CDS
|
|
|
involved in thiamin biosynthesis; alternative pyrimidine biosynthesis
|
|
443889-444398
|
+
|
CDS
|
yajQ
|
|
orf; hypothetical protein
|
|
444526-445896
|
-
|
CDS
|
|
|
putative transport protein
|
|
| |
Reported regulatory
sites for yajQ:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.606
|
443741-443759
|
tcatt GTTCCTCCTCACCCGCAAC cactc
|
-
|
0
|
-
|
|
|
|
|
1.178
|
443783-443799
|
aggct ATCCCTTAATTGTGCAT gctgt
|
-
|
0
|
-
|
|
|
|
|
1.178
|
443812-443828
|
cgact ATGCACAATTAAGGGAT acgtc
|
-
|
0
|
-
|
|
|
|
|
1.163
|
443862-443882
|
taact TTGCGGGTATTATGCTTCGCA tcaaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|