|
ybaB
|
| |
| Information
for ybaB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
491316-493247
|
+
|
CDS
|
|
|
DNA polymerase III; tau and gamma subunits; DNA elongation factor III
|
|
493300-493629
|
+
|
CDS
|
ybaB
|
|
orf; hypothetical protein
|
|
493629-494234
|
+
|
CDS
|
|
|
recombination and repair
|
|
| |
Reported regulatory
sites for ybaB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.759
|
493248-493266
|
tttga TCGTAAGCACAGCTTACGT tcgtc
|
-
|
0
|
-
|
|
|
|
|
0.646
|
493276-493295
|
catcc TTAACGTGATTGAGAGAGAA accta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|