|
ybaC
|
| |
| Information
for ybaC, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
497279-498241
|
+
|
CDS
|
|
|
ferrochelatase: final enzyme of heme biosynthesis
|
|
498238-499197
|
-
|
CDS
|
ybaC
|
|
putative lipase (EC 3.1.1.-)
|
|
499349-500653
|
+
|
CDS
|
|
|
inosine-guanosine kinase
|
|
| |
Reported regulatory
sites for ybaC:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.468
|
499208-499231 R
|
tggtt CCTTACAATGACGTAATTTGAAAG gagtt
|
-
|
0
|
-
|
|
|
|
|
0.306
|
499251-499271 R
|
agttt CAATATCAGCAGGCGGGATCG cattt
|
-
|
0
|
-
|
|
|
|
|
0.223
|
499302-499317 R
|
gcggc GAATGTTAACACAATC tgacg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|