|
ybaE
|
| |
| Information
for ybaE, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
464076-464771
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
464836-466536
|
-
|
CDS
|
ybaE
|
|
orf; hypothetical protein
|
|
466624-467454
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for ybaE:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.003
|
466563-466584 R
|
tgata TATACGGAAGTAATAGTGAATA gttaa
|
-
|
0
|
-
|
|
|
|
|
1.205
|
466539-466561 R
|
aatag TTAAATAATATTGTTCCGGGTTT atatg
|
-
|
0
|
-
|
|
|
|
|
1.022
|
466589-466607 R
|
gttaa TGGTGATTGAGTATCACCT gatat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|