|
ybaN
|
| |
| Information
for ybaN, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
489509-490036
|
-
|
CDS
|
|
|
primosomal replication protein N''
|
|
490106-490483
|
+
|
CDS
|
ybaN
|
|
putative gene 58
|
|
490636-491187
|
+
|
CDS
|
|
|
adenine phosphoribosyltransferase
|
|
| |
Reported regulatory
sites for ybaN:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.279
|
490063-490080
|
ataat TGTTATGCTAAAGTAGCC actct
|
-
|
0
|
-
|
|
|
|
|
0.927
|
490052-490068
|
caatg AAAATGATAATTGTTAT gctaa
|
-
|
0
|
-
|
|
|
|
|
0.399
|
490044-490060
|
taaga CCTCAATGAAAATGATA attgt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|