ybaU
 
Information for ybaU, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
460675-460947
+
CDS
DNA-binding protein HU-beta; NS1 (HU-1)
461139-463010
+
CDS
ybaU
putative protease maturation protein
463161-463532
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for ybaU:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.852
460992-461007
catct ACTGATGTGCCTTTTT tattt
-
0
-
2.207
460966-460989
tgggg ATGTGACGAAGTTCAAGGGCGCAT ctact
-
0
-
2.207
461047-461070
ctgac AATTGCCCCCGTTTCTTGTCACAA taggc
-
0
-
2.082
461066-461082
cttgt CACAATAGGCCTTTGCG cgcat
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

Click here to go back