|
ybaV
|
| |
| Information
for ybaV, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
461139-463010
|
+
|
CDS
|
|
|
putative protease maturation protein
|
|
463161-463532
|
+
|
CDS
|
ybaV
|
|
orf; hypothetical protein
|
|
463626-464024
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for ybaV:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
8.884
|
463056-463077
|
caaga AAAGGTCGCTTTCGCGGCCTTT tccat
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.194
|
463133-463150
|
gattc CACTGTTAACAAACAAGG agaaa
|
-
|
0
|
-
|
|
|
|
|
3.284
|
463077-463097
|
gcctt TTCCATTTCTGAACATTGCCA tttgt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|