ybdA
 
Information for ybdA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
620408-621412
-
CDS
ferric enterobactin (enterochelin) transport
621523-622773
+
CDS
ybdA
putative transport
622777-623733
-
CDS
ferric enterobactin (enterochelin) binding protein; periplasmic component
 
Reported regulatory sites for ybdA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
8.030
621426-621448
ccatg ATAATGAAATTAATTATCGTTAT cgatc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.241
621459-621478
ttatt TGGATATGTTAGCATGTGCA gccta
-
0
-
2.846
621489-621505
agaat AGGTATTTAAAATATTT gatgg
-
0
-
 
Critical MAP values:
p=0.01
6.82
p=0.05
5.66
p=0.1
5.03
p=0.2
4.36

Click here to go back