ycaP
 
Information for ycaP, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
954095-955864
-
CDS
orf; hypothetical protein
955985-956677
+
CDS
ycaP
orf; hypothetical protein
956876-957964
+
CDS
3-phosphoserine aminotransferase
 
Reported regulatory sites for ycaP:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.568
955878-955901
tacgg AAAGCGCGCAATAATACGGGTTTT atctc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.942
955937-955953
cgatg AACTGTTGACTATGCTT ttagc
-
0
-
0.737
955947-955970
ttgac TATGCTTTTAGCGGATAAACCACG ttaag
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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