yceD
 
Information for yceD, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1145234-1145857
-
CDS
orf; hypothetical protein
1146017-1146538
+
CDS
yceD
orf; hypothetical protein
1146590-1146763
+
CDS
50S ribosomal subunit protein L32
 
Reported regulatory sites for yceD:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.283
1145995-1146016
acgtt ACAAAGTTAATATGCGCGCCCT atgca
-
0
-
2.911
1145973-1145988
tgcct TTTTCTTTGACTCTAT gacgt
-
0
-
2.855
1145895-1145917
gtttg TTATCAGCACTGAACGAAAATAA agcag
-
0
-
2.855
1145923-1145945
agcag TAACCCGCAATGTGTGCGAATTA ttggc
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

Click here to go back