|
yceP
|
| |
| Information
for yceP, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1118691-1119809
|
-
|
CDS
|
|
|
sarcosine oxidase-like protein
|
|
1119924-1120178
|
-
|
CDS
|
yceP
|
|
orf; hypothetical protein
|
|
1120465-1120710
|
-
|
CDS
|
|
|
damage-inducible protein I
|
|
| |
Reported regulatory
sites for yceP:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.037
|
1120236-1120252 R
|
ggtat ACTGAAGTTGCTTCAGA taaaa
|
-
|
0
|
-
|
|
|
|
|
3.746
|
1120430-1120447 R
|
ttttt TGCCGGGTCGCCCCGGCT ttttt
|
-
|
0
|
-
|
|
|
|
|
3.077
|
1120257-1120278 R
|
aaatt CGGTGAATACCCTTACTTATTG gtata
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|