ychE
 
Information for ychE, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1294669-1297344
-
CDS
CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase
1297821-1298468
+
CDS
ychE
putative channel protein
1299206-1300837
+
CDS
oligopeptide transport; periplasmic binding protein
 
Reported regulatory sites for ychE:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.422
1297363-1297386
taatg TTAAACTTTTTTAGTAAATCATCT gctcg
-
0
-
3.422
1297497-1297520
acatt AGAGTTATTATCTCTAATGCGTCA cttcc
-
0
-
2.671
1297535-1297558
ggcgt AAGCAAGATTACTCACTTCTGGGT actga
-
0
-
2.671
1297576-1297599
atcca AATCAAATTTTTGCAAAGCTGACA ccttt
-
0
-
1.715
1297467-1297489
cactc ACTGTGATTTACTAAAAGAGTTT aaaca
-
0
-
1.715
1297628-1297650
ttata GCTAACAGTTAATAAATTGTAGT atgat
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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