|
ycjG
|
| |
| Information
for ycjG, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1386329-1386835
|
-
|
CDS
|
|
|
thiol peroxidase
|
|
1386912-1387919
|
+
|
CDS
|
ycjG
|
|
putative muconate cycloisomerase I (EC 5.5.-.-)
|
|
1387894-1388682
|
-
|
CDS
|
|
|
putative carboxypeptidase
|
|
| |
Reported regulatory
sites for ycjG:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.909
|
1386849-1386865
|
ttcct GTTTACATATAGTTAAC gtcac
|
-
|
0
|
-
|
|
|
|
|
2.535
|
1386876-1386897
|
accta GTTTATGCTAACTGTCAATAAC acagc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|