|
ydfG
|
| |
| Information
for ydfG, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1623359-1625404
|
-
|
CDS
|
|
|
dipeptidyl carboxypeptidase II
|
|
1625541-1626287
|
+
|
CDS
|
ydfG
|
|
putative oxidoreductase
|
|
1626376-1627062
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for ydfG:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA ST EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.257
|
1625502-1625523
|
ccgtg CTATGTTATTGACACACAAAAG cgttg
|
-
|
0
|
-
|
|
|
|
|
1.734
|
1625466-1625482
|
aatct TGCAATCCAGTATTACC cgctc
|
-
|
0
|
-
|
|
|
|
|
0.703
|
1625519-1625540
|
cacac AAAAGCGTTGAGGAACAGTGAG atgat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.40
|
|
p=0.05
|
4.29
|
|
p=0.1
|
3.77
|
|
p=0.2
|
3.19
|
|
|