ydhA
 
Information for ydhA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1715375-1716031
-
CDS
pyridoxinephosphate oxidase
1716090-1716338
-
CDS
ydhA
orf; hypothetical protein
1716517-1717626
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for ydhA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.263
1716496-1716512 R
atatc AGAGTTAACTGAATTTT tctta
-
0
-
3.389
1716388-1716410 R
ctatg AAAAAACTGTTAATTATCATTTT gccgg
-
0
-
2.729
1716406-1716427 R
aagtc TTCGGGATATGACTATGAAAAA actgt
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

Click here to go back