|
yeaD
|
| |
| Information
for yeaD, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1860795-1861790
|
+
|
CDS
|
|
|
glyceraldehyde-3-phosphate dehydrogenase A
|
|
1861853-1862758
|
+
|
CDS
|
yeaD
|
|
orf; hypothetical protein
|
|
1862806-1863660
|
-
|
CDS
|
|
|
putative an aldehyde reductase
|
|
| |
Reported regulatory
sites for yeaD:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.657
|
1861814-1861837
|
tctaa AAAGAGCGACTTCGGTCGCTCTTT ttttt
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.831
|
1861795-1861811
|
agttg AGATGACACTGTGATCT aaaaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|